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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
BRCA rs7562801 chr2:75968296 G/A 3.3E-6 1018 21.43 21.67 18.48 KM Plot
BRCA rs75660024 chr6:43193281 A/G 3.26E-12 1019 21.77 20.47 10.73 KM Plot
BRCA rs75800624 chr18:44633605 G/C 2.08E-5 1024 21.57 22.2 18.13 KM Plot
BRCA rs75808931 chr18:44693042 C/T 5.05E-6 1027 21.7 21.67 18.23 KM Plot
BRCA rs75901436 chr18:44689644 C/T 5.05E-6 1027 21.7 21.67 18.23 KM Plot
BRCA rs75934126 chr18:44679781 T/C 5.05E-6 1027 21.7 21.67 18.23 KM Plot
BRCA rs7597845 chr2:75998967 G/T 1.1E-5 1026 21.5 21.67 24.08 KM Plot
BRCA rs75993950 chr1:41586313 C/A 3.2E-6 1026 21.83 20.67 10.75 KM Plot
BRCA rs76334523 chr6:43199378 G/A 5.23E-14 1013 21.73 20.47 11.65 KM Plot
BRCA rs76594057 chr18:44637272 A/G 2.12E-5 1022 21.57 22.2 18.13 KM Plot
BRCA rs76655632 chr18:44656852 TAA/T 2.03E-5 1022 21.73 22.2 18.03 KM Plot
BRCA rs76783114 chr9:94127468 G/A 1.44E-7 1024 22.15 19.17 9.15 KM Plot
BRCA rs76922914 chr18:44688454 T/C 5.09E-6 1026 21.73 21.67 18.23 KM Plot
BRCA rs77141460 chr10:91586376 G/A 9.97E-7 1021 21.48 23.1 5.33 KM Plot
BRCA rs77149690 chr18:44697143 T/C 3.87E-6 1026 21.7 21.58 18.23 KM Plot